I also recall some tiny blue blobs on some exposures caused by very fine particles getting onto the film.....not sure how...
The magazines were not standard Hasselblad mags, nor were they installed in the customary way. They were "longroll" magazines designed by a third-party company in Hollywood -- not specifically for Apollo, but modified for use on Apollo by the company. The longroll magazine could hold up to 180 frames, depending on film thickness. The standard Hasselblad magazine for this format, using commercial film, holds 12-20 frames.
Normally the magazine is fitted with a darkslide to prevent exposing the film during magazine changes. The magazine is attached to the back of the body and then the darkslide is removed, opening the gate to the light path. Subsequently the magazine cannot be removed until the darkslide is once again inserted.
However for Apollo the cameras and magazines were modified to allow interchanging the magazines without the darkslide in place. The magazine was removed from storage, the darkslide was removed and discarded, and the magazine attached to the back. At the end of the roll, the film trailer was simply wound into the magazine and the magazine detached and stored. Several initial and final frames of each roll were often sunstruck.
All of that has been to point out that the possibility of dust contamination and subsequent scratching was very real and even likely. After the darkslide was removed, nothing prevented lunar dust from adhering to the film surface and then being pressed subsequently against the reseau plate. Conversely, with the magazine removed, nothing prevented dust from adhering to the exposed reseau plate. Either mechanism, or both, would subject the film to possible particulate erosion.
but the explanation pointed towards the emulsion on the film itself, having the top layer eroded.
Yes, I confirmed this possibility with my own scratch tests on E-3 and E-6 emulsions. Lightly abraded, the resulting transparency biases toward blue in the abrasion spots.